Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gm27801-201ENSMUST00000184174 223 ntBASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gm8493-201ENSMUST00000196881 489 ntBASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-4A0A0G2JFX3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gm21956-201ENSMUST00000179946 522 ntBASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.53□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm13241-201ENSMUST00000094493 780 ntBASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms