Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm13238-201ENSMUST00000117655 780 ntBASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-2A0A0G2JF93 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm40881-201ENSMUST00000223397 166 ntBASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm5921-201ENSMUST00000075898 882 ntBASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-2A0A0G2JF93 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm27045-201ENSMUST00000182145 1402 ntBASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-2A0A0G2JF93 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-2A0A0G2JF93 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.03□□□□□ -0.48
Trav13n-2A0A0G2JF93 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms