Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm10653-202ENSMUST00000139570 835 ntBASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms