Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm9959-201ENSMUST00000068277 390 ntBASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.74□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms