Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-3A0A0B4J1K1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-3A0A0B4J1K1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-3A0A0B4J1K1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-3A0A0B4J1K1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-3A0A0B4J1K1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms