Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-3A0A0B4J1H2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Gm7860-201ENSMUST00000121190 879 ntBASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv13-3A0A0B4J1H2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms