Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv5A0A0B4J1G9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv5A0A0B4J1G9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv5A0A0B4J1G9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.62□□□□□ -0.07
Trbv5A0A0B4J1G9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms