Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Gm26833-201ENSMUST00000180899 440 ntBASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
BC053393A0A0B4J1F6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BC053393A0A0B4J1F6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.53□□□□□ -0.08
BC053393A0A0B4J1F6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
BC053393A0A0B4J1F6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BC053393A0A0B4J1F6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BC053393A0A0B4J1F6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
BC053393A0A0B4J1F6 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.52□□□□□ -0.08
BC053393A0A0B4J1F6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BC053393A0A0B4J1F6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BC053393A0A0B4J1F6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BC053393A0A0B4J1F6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms