Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm26524-201ENSMUST00000192339 390 ntBASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbc1A0A0A6YWV4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm4968-201ENSMUST00000071458 858 ntBASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trbc1A0A0A6YWV4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm12441-201ENSMUST00000121806 588 ntBASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Rab3c-203ENSMUST00000224180 967 ntBASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbc1A0A0A6YWV4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms