Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Smad6-203ENSMUST00000179458 273 ntBASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-6A0A075B6B2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6n-6A0A075B6B2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6n-6A0A075B6B2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6n-6A0A075B6B2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6n-6A0A075B6B2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6n-6A0A075B6B2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6n-6A0A075B6B2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.52□□□□□ -0.24
Trav6n-6A0A075B6B2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6n-6A0A075B6B2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6n-6A0A075B6B2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6n-6A0A075B6B2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 AA386476-201ENSMUST00000098781 1665 ntBASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6n-6A0A075B6B2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6n-6A0A075B6B2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6n-6A0A075B6B2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6n-6A0A075B6B2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6n-6A0A075B6B2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav6n-6A0A075B6B2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms