Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-7A0A075B6B0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm37179-201ENSMUST00000194862 823 ntBASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-7A0A075B6B0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-7A0A075B6B0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav6d-7A0A075B6B0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6d-7A0A075B6B0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.02□□□□□ -0.16
Trav6d-7A0A075B6B0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6d-7A0A075B6B0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6d-7A0A075B6B0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6d-7A0A075B6B0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6d-7A0A075B6B0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav6d-7A0A075B6B0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6d-7A0A075B6B0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6d-7A0A075B6B0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-7A0A075B6B0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-7A0A075B6B0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-7A0A075B6B0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-7A0A075B6B0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav6d-7A0A075B6B0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav6d-7A0A075B6B0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-7A0A075B6B0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-7A0A075B6B0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-7A0A075B6B0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-7A0A075B6B0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms