Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-7A0A075B6A6 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.47■□□□□ 0.07
Trav6n-7A0A075B6A6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.47■□□□□ 0.07
Trav6n-7A0A075B6A6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-7A0A075B6A6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-7A0A075B6A6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 Rab3c-203ENSMUST00000224180 967 ntBASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-7A0A075B6A6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6n-7A0A075B6A6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6n-7A0A075B6A6 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.46■□□□□ 0.06
Trav6n-7A0A075B6A6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-7A0A075B6A6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-7A0A075B6A6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-7A0A075B6A6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Gm4968-201ENSMUST00000071458 858 ntBASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav6n-7A0A075B6A6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-7A0A075B6A6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-7A0A075B6A6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav6n-7A0A075B6A6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav6n-7A0A075B6A6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Trav6n-7A0A075B6A6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-7A0A075B6A6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-7A0A075B6A6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6n-7A0A075B6A6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-7A0A075B6A6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav6n-7A0A075B6A6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms