Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Gm10420-201ENSMUST00000121713 882 ntBASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-3A0A075B6A4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-3A0A075B6A4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12d-3A0A075B6A4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12d-3A0A075B6A4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12d-3A0A075B6A4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12d-3A0A075B6A4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12d-3A0A075B6A4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12d-3A0A075B6A4 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-3A0A075B6A4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Gm9870-201ENSMUST00000063874 645 ntBASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-3A0A075B6A4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms