Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav5-4A0A075B652 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Trav5-4A0A075B652 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav5-4A0A075B652 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-4A0A075B652 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-4A0A075B652 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-4A0A075B652 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Gm13146-201ENSMUST00000118508 780 ntBASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Gm13234-201ENSMUST00000120010 747 ntBASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-4A0A075B652 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 Gm42778-201ENSMUST00000199644 553 ntBASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav5-4A0A075B652 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms