Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav16d-dv11A0A075B617 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav16d-dv11A0A075B617 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.38□□□□□ -0.27
Trav16d-dv11A0A075B617 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16d-dv11A0A075B617 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16d-dv11A0A075B617 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms