Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-6A0A075B603 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-6A0A075B603 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-6A0A075B603 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-6A0A075B603 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-6A0A075B603 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-6A0A075B603 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms