Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-1A0A075B5Z7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 Gm5643-201ENSMUST00000117081 966 ntBASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 Gm38285-201ENSMUST00000192928 922 ntBASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.65■□□□□ 0.1
Trav5-1A0A075B5Z7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 Gm10812-201ENSMUST00000099864 546 ntBASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-1A0A075B5Z7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav5-1A0A075B5Z7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-1A0A075B5Z7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-1A0A075B5Z7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 Gm10138-203ENSMUST00000206952 366 ntBASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms