Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Thap6-201ENSMUST00000191860 3151 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm23979-201ENSMUST00000104071 128 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm25785-201ENSMUST00000104129 125 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm14863-201ENSMUST00000119648 307 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm11198-201ENSMUST00000119771 974 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm11796-201ENSMUST00000120208 972 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm14900-201ENSMUST00000120304 733 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm12101-201ENSMUST00000121590 390 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm11545-201ENSMUST00000146507 375 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm6264-201ENSMUST00000160802 624 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm20454-201ENSMUST00000172713 221 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm20926-201ENSMUST00000194457 696 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm7769-201ENSMUST00000212900 933 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm6436-201ENSMUST00000077163 451 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm29486-201ENSMUST00000088648 372 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Malat1-201ENSMUST00000172812 6983 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm12375-201ENSMUST00000119331 921 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm5843-201ENSMUST00000121631 476 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm8648-201ENSMUST00000122457 221 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm23632-201ENSMUST00000175289 125 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm37376-201ENSMUST00000192176 453 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm19088-201ENSMUST00000198800 566 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm45514-201ENSMUST00000211531 689 ntBASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.32□□□□□ -1.4
Upk3aQ9JKX8 Gm4556-201ENSMUST00000217808 355 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 103.4 ms