Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 AC158605.3-201ENSMUST00000218999 2538 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm11972-201ENSMUST00000118514 389 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm12740-201ENSMUST00000118794 308 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm21877-201ENSMUST00000185640 694 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm7804-202ENSMUST00000194187 854 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm42581-201ENSMUST00000201774 966 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 CT010453.2-201ENSMUST00000227005 483 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Gm9800-201ENSMUST00000052615 336 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Mir106b-201ENSMUST00000083580 82 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.48□□□□□ -1.21
Smc1aQ9CU62 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm15203-201ENSMUST00000117668 455 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm11485-201ENSMUST00000120048 1175 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm5166-201ENSMUST00000121332 573 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm29357-201ENSMUST00000186877 698 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm44342-201ENSMUST00000196874 129 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm44383-201ENSMUST00000198940 129 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 AC117240.1-201ENSMUST00000199436 61 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm7452-201ENSMUST00000200764 788 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 AC167013.4-201ENSMUST00000226712 317 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm26130-201ENSMUST00000083171 138 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.47□□□□□ -1.21
Smc1aQ9CU62 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
Smc1aQ9CU62 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Smc1aQ9CU62 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Smc1aQ9CU62 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Smc1aQ9CU62 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Smc1aQ9CU62 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Mir678-201ENSMUST00000102114 84 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 190 ms