Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm5125-201ENSMUST00000148614 624 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm25722-201ENSMUST00000157498 279 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm20615-201ENSMUST00000177503 705 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm29385-201ENSMUST00000186831 363 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm18752-201ENSMUST00000192876 608 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Trbv9-201ENSMUST00000194494 290 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm23011-202ENSMUST00000197855 275 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm44982-201ENSMUST00000208795 471 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm38574-201ENSMUST00000211855 640 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 AC131654.1-201ENSMUST00000219675 745 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Mir3068-201ENSMUST00000083004 136 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm9839-201ENSMUST00000195252 1437 ntBASIC5.81□□□□□ -1.48
Nkx3-1P97436 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nkx3-1P97436 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm43395-201ENSMUST00000198717 2240 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm30698-201ENSMUST00000214789 3198 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm14018-201ENSMUST00000119042 455 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm8648-201ENSMUST00000122457 221 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm23740-201ENSMUST00000157385 100 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm25904-201ENSMUST00000158491 143 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm25717-201ENSMUST00000158631 353 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm27972-201ENSMUST00000184720 137 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm27998-201ENSMUST00000184902 361 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm37349-201ENSMUST00000194205 624 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm43689-201ENSMUST00000195951 427 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm35619-201ENSMUST00000222548 600 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms