Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
H3f3aP84244 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
H3f3aP84244 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
H3f3aP84244 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
H3f3aP84244 Gm8177-201ENSMUST00000181591 1336 ntBASIC5.92□□□□□ -1.46
H3f3aP84244 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.92□□□□□ -1.46
H3f3aP84244 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
H3f3aP84244 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
H3f3aP84244 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
H3f3aP84244 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
H3f3aP84244 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
H3f3aP84244 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
H3f3aP84244 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
H3f3aP84244 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
H3f3aP84244 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
H3f3aP84244 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
H3f3aP84244 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Apc-ps1-201ENSMUST00000119356 470 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC5.91□□□□□ -1.46
H3f3aP84244 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.91□□□□□ -1.46
H3f3aP84244 Gm10364-202ENSMUST00000153034 1001 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Gm23756-201ENSMUST00000157582 114 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Gm27970-201ENSMUST00000184854 407 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC5.91□□□□□ -1.46
H3f3aP84244 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC5.91□□□□□ -1.46
H3f3aP84244 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Gm7019-201ENSMUST00000194122 369 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Gm18838-201ENSMUST00000204855 886 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Gm9367-201ENSMUST00000205703 546 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 Gm17997-201ENSMUST00000211801 840 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Gm7441-201ENSMUST00000220697 1074 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Gm5928-201ENSMUST00000221839 466 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Gm6575-201ENSMUST00000222946 697 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 AV026068-218ENSMUST00000223980 575 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
H3f3aP84244 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.91□□□□□ -1.46
H3f3aP84244 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
H3f3aP84244 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3f3aP84244 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H3f3aP84244 Gm42874-201ENSMUST00000198888 1774 ntBASIC5.9□□□□□ -1.46
H3f3aP84244 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.9□□□□□ -1.46
H3f3aP84244 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.9□□□□□ -1.46
H3f3aP84244 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H3f3aP84244 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H3f3aP84244 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.9□□□□□ -1.46
H3f3aP84244 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H3f3aP84244 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H3f3aP84244 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H3f3aP84244 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.9□□□□□ -1.46
H3f3aP84244 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
H3f3aP84244 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
H3f3aP84244 Gm7821-201ENSMUST00000117111 788 ntBASIC5.9□□□□□ -1.46
H3f3aP84244 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
H3f3aP84244 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.9□□□□□ -1.46
H3f3aP84244 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H3f3aP84244 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.9□□□□□ -1.46
H3f3aP84244 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
H3f3aP84244 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.9□□□□□ -1.46
H3f3aP84244 Gm25435-201ENSMUST00000158277 267 ntBASIC5.9□□□□□ -1.46
H3f3aP84244 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H3f3aP84244 Mir5617-201ENSMUST00000176786 57 ntBASIC5.9□□□□□ -1.46
H3f3aP84244 Gm10136-201ENSMUST00000183196 435 ntBASIC5.9□□□□□ -1.46
H3f3aP84244 Gm27299-201ENSMUST00000184593 103 ntBASIC5.9□□□□□ -1.46
H3f3aP84244 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H3f3aP84244 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms