Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CiitaP79621 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CiitaP79621 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CiitaP79621 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Gm14485-201ENSMUST00000119489 493 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Gm14614-201ENSMUST00000119873 384 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Gm14796-201ENSMUST00000121216 959 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.26□□□□□ -1.25
CiitaP79621 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.26□□□□□ -1.25
CiitaP79621 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC7.26□□□□□ -1.25
CiitaP79621 Gm24239-201ENSMUST00000157791 255 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Gm22311-201ENSMUST00000158006 110 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.26□□□□□ -1.25
CiitaP79621 Gm8185-201ENSMUST00000160999 669 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CiitaP79621 Gm26509-201ENSMUST00000180947 948 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.26□□□□□ -1.25
CiitaP79621 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.26□□□□□ -1.25
CiitaP79621 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.26□□□□□ -1.25
CiitaP79621 Gm44374-201ENSMUST00000199821 140 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.26□□□□□ -1.25
CiitaP79621 Gm18586-201ENSMUST00000217265 518 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.26□□□□□ -1.25
CiitaP79621 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.26□□□□□ -1.25
CiitaP79621 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.26□□□□□ -1.25
CiitaP79621 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
CiitaP79621 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CiitaP79621 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CiitaP79621 AC120347.2-201ENSMUST00000222224 2015 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CiitaP79621 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CiitaP79621 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CiitaP79621 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CiitaP79621 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CiitaP79621 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.25□□□□□ -1.25
CiitaP79621 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.25□□□□□ -1.25
CiitaP79621 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CiitaP79621 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.25□□□□□ -1.25
CiitaP79621 Gm26079-201ENSMUST00000104066 133 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Gm15164-201ENSMUST00000122203 271 ntBASIC7.25□□□□□ -1.25
CiitaP79621 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.25□□□□□ -1.25
CiitaP79621 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.25□□□□□ -1.25
CiitaP79621 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.25□□□□□ -1.25
CiitaP79621 Gm43048-201ENSMUST00000196101 388 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Gm42581-201ENSMUST00000201774 966 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Gm17918-201ENSMUST00000205315 574 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.25□□□□□ -1.25
CiitaP79621 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.25□□□□□ -1.25
CiitaP79621 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.25□□□□□ -1.25
CiitaP79621 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.25□□□□□ -1.25
CiitaP79621 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CiitaP79621 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CiitaP79621 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.25□□□□□ -1.25
CiitaP79621 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CiitaP79621 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CiitaP79621 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CiitaP79621 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CiitaP79621 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms