Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.72□□□□□ -1.33
HttP42859 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Gm13738-201ENSMUST00000122437 469 ntBASIC6.72□□□□□ -1.33
HttP42859 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
HttP42859 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Gm44259-201ENSMUST00000204996 298 ntBASIC6.72□□□□□ -1.33
HttP42859 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.72□□□□□ -1.33
HttP42859 Gm46379-201ENSMUST00000222551 265 ntBASIC6.72□□□□□ -1.33
HttP42859 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HttP42859 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
HttP42859 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
HttP42859 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HttP42859 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
HttP42859 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Gm6541-201ENSMUST00000165542 561 ntBASIC6.71□□□□□ -1.34
HttP42859 Gm20674-201ENSMUST00000177452 369 ntBASIC6.71□□□□□ -1.34
HttP42859 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.71□□□□□ -1.34
HttP42859 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC6.71□□□□□ -1.34
HttP42859 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.71□□□□□ -1.34
HttP42859 Clec2j-201ENSMUST00000032517 515 ntBASIC6.71□□□□□ -1.34
HttP42859 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.71□□□□□ -1.34
HttP42859 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HttP42859 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HttP42859 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.71□□□□□ -1.34
HttP42859 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.71□□□□□ -1.34
HttP42859 Mir6992-201ENSMUST00000183342 109 ntBASIC6.71□□□□□ -1.34
HttP42859 Gm28567-201ENSMUST00000190270 693 ntBASIC6.71□□□□□ -1.34
HttP42859 Gm37044-201ENSMUST00000193531 693 ntBASIC6.71□□□□□ -1.34
HttP42859 Gm38369-201ENSMUST00000195101 693 ntBASIC6.71□□□□□ -1.34
HttP42859 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.71□□□□□ -1.34
HttP42859 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HttP42859 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HttP42859 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HttP42859 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Gm39041-201ENSMUST00000205557 3902 ntBASIC6.71□□□□□ -1.34
HttP42859 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HttP42859 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HttP42859 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HttP42859 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC6.7□□□□□ -1.34
HttP42859 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
HttP42859 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.7□□□□□ -1.34
HttP42859 Gm27970-201ENSMUST00000184854 407 ntBASIC6.7□□□□□ -1.34
HttP42859 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.7□□□□□ -1.34
HttP42859 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 AU020206-202ENSMUST00000206358 3009 ntBASIC6.7□□□□□ -1.34
HttP42859 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
HttP42859 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.7□□□□□ -1.34
HttP42859 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HttP42859 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC6.7□□□□□ -1.34
HttP42859 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Gm11366-201ENSMUST00000119279 429 ntBASIC6.7□□□□□ -1.34
HttP42859 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HttP42859 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Gm6931-201ENSMUST00000183103 371 ntBASIC6.7□□□□□ -1.34
HttP42859 Gm17775-201ENSMUST00000198542 258 ntBASIC6.7□□□□□ -1.34
HttP42859 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.7□□□□□ -1.34
HttP42859 Gm31931-201ENSMUST00000219666 222 ntBASIC6.7□□□□□ -1.34
HttP42859 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.7□□□□□ -1.34
HttP42859 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
HttP42859 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.7□□□□□ -1.34
HttP42859 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms