Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm14300-201ENSMUST00000120800 946 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm26086-201ENSMUST00000157902 263 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Mir3062-201ENSMUST00000174986 105 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm28439-201ENSMUST00000187714 876 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm36448-201ENSMUST00000199916 438 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm43794-201ENSMUST00000200971 692 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm17918-201ENSMUST00000205315 574 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col18a1P39061 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col18a1P39061 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col18a1P39061 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col18a1P39061 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col18a1P39061 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Col18a1P39061 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col18a1P39061 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC8.76□□□□□ -1.01
Col18a1P39061 AC166358.5-201ENSMUST00000220706 1302 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col18a1P39061 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm14796-201ENSMUST00000121216 959 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm22552-201ENSMUST00000157796 337 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm8323-201ENSMUST00000168436 1201 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm2877-201ENSMUST00000178248 1204 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm8324-201ENSMUST00000178911 1204 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm2871-201ENSMUST00000179984 1204 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm1972-201ENSMUST00000181606 964 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Mir7028-201ENSMUST00000185016 64 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm27427-201ENSMUST00000185134 193 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm37376-201ENSMUST00000192176 453 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm37770-201ENSMUST00000192855 772 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm29745-201ENSMUST00000198005 687 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Mir219c-201ENSMUST00000199860 60 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm7439-201ENSMUST00000214053 835 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm3785-201ENSMUST00000221000 202 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gm19189-201ENSMUST00000221689 754 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Gm44286-201ENSMUST00000204098 1487 ntBASIC8.75□□□□□ -1.01
Col18a1P39061 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC8.75□□□□□ -1.01
Col18a1P39061 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Col18a1P39061 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Gm25152-201ENSMUST00000157117 114 ntBASIC8.75□□□□□ -1.01
Col18a1P39061 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC8.75□□□□□ -1.01
Col18a1P39061 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC8.75□□□□□ -1.01
Col18a1P39061 Gm9480-201ENSMUST00000198038 616 ntBASIC8.75□□□□□ -1.01
Col18a1P39061 Igkv4-56-201ENSMUST00000198436 349 ntBASIC8.75□□□□□ -1.01
Col18a1P39061 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC8.75□□□□□ -1.01
Col18a1P39061 Gm44184-201ENSMUST00000204290 132 ntBASIC8.75□□□□□ -1.01
Col18a1P39061 Gm44919-201ENSMUST00000208587 1073 ntBASIC8.75□□□□□ -1.01
Col18a1P39061 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC8.75□□□□□ -1.01
Col18a1P39061 n-R5s204-201ENSMUST00000082972 119 ntBASIC8.75□□□□□ -1.01
Col18a1P39061 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Col18a1P39061 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
Col18a1P39061 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Col18a1P39061 Gm43627-201ENSMUST00000197119 2299 ntBASIC8.75□□□□□ -1.01
Col18a1P39061 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Col18a1P39061 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col18a1P39061 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.75□□□□□ -1.01
Col18a1P39061 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms