Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.48□□□□□ -1.21
Col2a1P28481 Gm15048-201ENSMUST00000118201 954 ntBASIC7.48□□□□□ -1.21
Col2a1P28481 Gm13772-201ENSMUST00000118431 317 ntBASIC7.48□□□□□ -1.21
Col2a1P28481 Gm9005-201ENSMUST00000119908 607 ntBASIC7.48□□□□□ -1.21
Col2a1P28481 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm25057-201ENSMUST00000157366 88 ntBASIC7.48□□□□□ -1.21
Col2a1P28481 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.48□□□□□ -1.21
Col2a1P28481 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm37570-201ENSMUST00000195411 3106 ntBASIC7.48□□□□□ -1.21
Col2a1P28481 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
Col2a1P28481 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Col2a1P28481 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Col2a1P28481 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Col2a1P28481 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
Col2a1P28481 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.47□□□□□ -1.21
Col2a1P28481 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Col2a1P28481 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Col2a1P28481 Gm14158-201ENSMUST00000118409 308 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Col2a1P28481 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.47□□□□□ -1.21
Col2a1P28481 Gm17366-201ENSMUST00000167629 187 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Gm27512-201ENSMUST00000175328 126 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Gm21524-201ENSMUST00000190499 696 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Gm21715-201ENSMUST00000191056 694 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Gm37604-201ENSMUST00000191749 1272 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Gm8860-201ENSMUST00000193160 445 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Gm3800-201ENSMUST00000221086 554 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 AC159979.1-201ENSMUST00000227927 342 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Gm9788-201ENSMUST00000057038 906 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Col2a1P28481 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.47□□□□□ -1.21
Col2a1P28481 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Col2a1P28481 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col2a1P28481 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.47□□□□□ -1.21
Col2a1P28481 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Col2a1P28481 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.46□□□□□ -1.21
Col2a1P28481 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.46□□□□□ -1.21
Col2a1P28481 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Col2a1P28481 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
Col2a1P28481 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Col2a1P28481 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Col2a1P28481 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Col2a1P28481 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 Gm12833-201ENSMUST00000136112 477 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 Gm23896-201ENSMUST00000158109 130 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Col2a1P28481 Mir7653-201ENSMUST00000184358 61 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.46□□□□□ -1.22
Col2a1P28481 Gm7166-201ENSMUST00000199715 303 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 Gm44422-201ENSMUST00000204142 1025 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.46□□□□□ -1.22
Col2a1P28481 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.46□□□□□ -1.22
Col2a1P28481 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.46□□□□□ -1.22
Col2a1P28481 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms