Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Gm24434-201ENSMUST00000104081 132 ntBASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Gm12244-201ENSMUST00000119500 291 ntBASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Gm26381-201ENSMUST00000174895 92 ntBASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Gm27512-201ENSMUST00000175328 126 ntBASIC7.33□□□□□ -1.24
Scn3aA2ASI5 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Gm44361-201ENSMUST00000197960 94 ntBASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.33□□□□□ -1.24
Scn3aA2ASI5 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.33□□□□□ -1.24
Scn3aA2ASI5 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Cma2-202ENSMUST00000228263 857 ntBASIC7.33□□□□□ -1.24
Scn3aA2ASI5 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.33□□□□□ -1.24
Scn3aA2ASI5 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Gm13207-201ENSMUST00000119862 773 ntBASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Gm29160-201ENSMUST00000190094 699 ntBASIC7.32□□□□□ -1.24
Scn3aA2ASI5 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.32□□□□□ -1.24
Scn3aA2ASI5 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 AC114572.1-201ENSMUST00000227262 300 ntBASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.32□□□□□ -1.24
Scn3aA2ASI5 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Scn3aA2ASI5 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Gm12181-201ENSMUST00000121448 531 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Gm16269-201ENSMUST00000160532 409 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Gm4332-201ENSMUST00000196114 346 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 AC159205.4-201ENSMUST00000225964 704 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Olfr519-201ENSMUST00000084752 960 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Scn3aA2ASI5 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms