Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm17223-201ENSMUST00000171413 481 ntBASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm23187-201ENSMUST00000175746 86 ntBASIC7.92□□□□□ -1.14
Clp1Q99LI9 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.92□□□□□ -1.14
Clp1Q99LI9 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Mir6989-201ENSMUST00000184812 65 ntBASIC7.92□□□□□ -1.14
Clp1Q99LI9 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm8556-201ENSMUST00000210437 664 ntBASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm46364-201ENSMUST00000218548 319 ntBASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm18960-201ENSMUST00000222962 713 ntBASIC7.92□□□□□ -1.14
Clp1Q99LI9 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.92□□□□□ -1.14
Clp1Q99LI9 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm43917-201ENSMUST00000191984 2360 ntBASIC7.92□□□□□ -1.14
Clp1Q99LI9 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm44165-201ENSMUST00000203093 1469 ntBASIC7.92□□□□□ -1.14
Clp1Q99LI9 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
Clp1Q99LI9 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Clp1Q99LI9 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm38264-201ENSMUST00000194850 2032 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm22707-201ENSMUST00000103834 110 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm11406-201ENSMUST00000117418 484 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm11212-201ENSMUST00000118337 618 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm12944-201ENSMUST00000119262 463 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm14353-201ENSMUST00000122200 869 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm15077-201ENSMUST00000122344 362 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm23429-201ENSMUST00000122486 149 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm2735-201ENSMUST00000136133 277 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm29156-201ENSMUST00000187764 499 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm3496-201ENSMUST00000188283 745 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm8101-201ENSMUST00000192796 478 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm43546-201ENSMUST00000196721 943 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm18635-201ENSMUST00000199020 1060 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm36378-201ENSMUST00000201709 388 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm43772-201ENSMUST00000202052 379 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm42713-201ENSMUST00000202709 945 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm43926-201ENSMUST00000203978 430 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm45136-201ENSMUST00000205793 943 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm8748-201ENSMUST00000211125 587 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 AC151843.1-201ENSMUST00000215960 691 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Clp1Q99LI9 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 AC157572.4-201ENSMUST00000228203 549 ntBASIC7.91□□□□□ -1.14
Clp1Q99LI9 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Clp1Q99LI9 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms