Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm14353-201ENSMUST00000122200 869 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm12778-201ENSMUST00000122341 333 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm10925-201ENSMUST00000189941 678 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm36932-201ENSMUST00000195226 929 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm42752-201ENSMUST00000198394 1106 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm43176-201ENSMUST00000199653 2989 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm6681-201ENSMUST00000205215 607 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 CT030705.2-201ENSMUST00000225301 556 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Malat1-201ENSMUST00000172812 6983 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm24173-201ENSMUST00000104130 128 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm24239-201ENSMUST00000157791 255 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm9274-201ENSMUST00000182505 984 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Mir6908-201ENSMUST00000184056 63 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm28929-201ENSMUST00000185330 1193 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm8506-201ENSMUST00000186661 829 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm37620-201ENSMUST00000192910 501 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm43383-201ENSMUST00000195981 469 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Gm9985-201ENSMUST00000044101 510 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim9Q8C7M3 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Gm14513-201ENSMUST00000117403 123 ntBASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Gm13739-201ENSMUST00000118020 530 ntBASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.3□□□□□ -1.24
Trim9Q8C7M3 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms