Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc60Q8C4J0 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm15216-201ENSMUST00000118058 277 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 M6pr-ps-201ENSMUST00000120481 830 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm7494-201ENSMUST00000121248 441 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm24682-201ENSMUST00000158764 137 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm3140-201ENSMUST00000163523 481 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm22642-201ENSMUST00000175352 252 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm18447-201ENSMUST00000187501 307 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm29160-201ENSMUST00000190094 699 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm9517-201ENSMUST00000195021 874 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Glycam1-204ENSMUST00000228895 641 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc60Q8C4J0 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Ccdc60Q8C4J0 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm23768-201ENSMUST00000104440 131 ntBASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm12504-202ENSMUST00000148026 306 ntBASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm16298-201ENSMUST00000161107 420 ntBASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm17834-201ENSMUST00000204322 891 ntBASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm2767-201ENSMUST00000209582 473 ntBASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm19324-201ENSMUST00000213229 1169 ntBASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm18879-201ENSMUST00000221187 1537 ntBASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc60Q8C4J0 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Gm22267-201ENSMUST00000104008 131 ntBASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Gm14900-201ENSMUST00000120304 733 ntBASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC8.32□□□□□ -1.08
Ccdc60Q8C4J0 Gm14457-201ENSMUST00000148069 1161 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms