Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Dgkh-206ENSMUST00000228362 3308 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm43621-201ENSMUST00000202733 2022 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm25943-201ENSMUST00000103791 90 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Mir466b-7-201ENSMUST00000103804 88 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Mir466b-5-201ENSMUST00000103900 88 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm15659-201ENSMUST00000118881 341 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm12959-201ENSMUST00000119396 403 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm14826-201ENSMUST00000121284 901 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm12639-201ENSMUST00000121400 493 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm18417-201ENSMUST00000176564 648 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Mir466b-4-201ENSMUST00000178801 90 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm25285-201ENSMUST00000178951 90 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Mir466b-6-201ENSMUST00000180061 90 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Mir466c-2-201ENSMUST00000180211 90 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm9556-201ENSMUST00000182938 940 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm28573-201ENSMUST00000187821 380 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm29143-201ENSMUST00000189462 201 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm28400-201ENSMUST00000191332 380 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm37871-201ENSMUST00000194973 688 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm18971-201ENSMUST00000197240 374 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm42938-201ENSMUST00000198414 1072 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm18765-201ENSMUST00000203166 660 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm19764-201ENSMUST00000203630 649 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm18252-203ENSMUST00000215855 757 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 AC122034.1-201ENSMUST00000227641 595 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 AC154681.1-201ENSMUST00000225876 1735 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Trim47Q8C0E3 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm37200-201ENSMUST00000193689 2172 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm14442-201ENSMUST00000119690 1736 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm24986-201ENSMUST00000104452 132 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm5759-201ENSMUST00000119203 811 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm11797-201ENSMUST00000121336 754 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm13024-201ENSMUST00000121756 718 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms