Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Snora23-201ENSMUST00000082517 184 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 n-R5s5-201ENSMUST00000083134 119 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm26329-201ENSMUST00000093723 110 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Scnn1a-207ENSMUST00000177329 2807 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Ppp1r12a-201ENSMUST00000070663 3403 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Sele-201ENSMUST00000027874 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 AC123858.1-201ENSMUST00000226948 1874 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Trim9-203ENSMUST00000167755 4559 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Slc2a5-201ENSMUST00000030826 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm1979-201ENSMUST00000168875 2025 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Trim35Q8C006 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Tnfaip1-202ENSMUST00000108277 3768 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Cd101-201ENSMUST00000147399 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Thrap3-203ENSMUST00000106142 2744 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Cd1d2-203ENSMUST00000194208 1527 ntAPPRIS P5 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim35Q8C006 AC168276.1-201ENSMUST00000218963 2385 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Bfar-202ENSMUST00000069281 2456 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Bnip3-201ENSMUST00000106112 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 BC026762-201ENSMUST00000206555 2503 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 2900052N01Rik-203ENSMUST00000191603 2695 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Pxmp4-201ENSMUST00000000896 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm28653-201ENSMUST00000185494 5276 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Pdcl-201ENSMUST00000009174 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Lig3-203ENSMUST00000092849 4560 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trim35Q8C006 Trav5-4-201ENSMUST00000103664 343 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm25563-201ENSMUST00000104603 74 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Cox4i2-202ENSMUST00000109821 733 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm14131-201ENSMUST00000119636 719 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC9.45□□□□□ -0.9
Trim35Q8C006 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trim35Q8C006 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm26913-201ENSMUST00000182391 732 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm8079-201ENSMUST00000182695 975 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC9.45□□□□□ -0.9
Trim35Q8C006 Cd22-203ENSMUST00000186154 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm28717-201ENSMUST00000189950 315 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm28620-201ENSMUST00000190463 439 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm38153-201ENSMUST00000195484 472 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm8929-201ENSMUST00000197781 1132 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm43833-201ENSMUST00000198828 293 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm44173-201ENSMUST00000204316 132 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm18703-201ENSMUST00000215318 333 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm35412-201ENSMUST00000220437 999 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Rce1-203ENSMUST00000224707 1255 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 AC115289.1-201ENSMUST00000224915 522 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 CT025689.4-201ENSMUST00000225926 601 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 AC159006.3-201ENSMUST00000226918 664 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Glycam1-204ENSMUST00000228895 641 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Defa21-201ENSMUST00000076754 418 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm4795-201ENSMUST00000095717 1008 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Ttc41-205ENSMUST00000219108 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Slc4a11-201ENSMUST00000099362 3196 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trim35Q8C006 Rtp3-203ENSMUST00000199891 2463 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trim35Q8C006 Pld5-201ENSMUST00000065967 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Pfkfb2-210ENSMUST00000189167 1558 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Phf19-201ENSMUST00000028232 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Lin7a-202ENSMUST00000105280 1634 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 Irx6-202ENSMUST00000167261 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim35Q8C006 AC158777.1-201ENSMUST00000226216 1724 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 AC164107.1-202ENSMUST00000228953 1816 ntBASIC9.45□□□□□ -0.9
Trim35Q8C006 Naa20-204ENSMUST00000134759 1883 ntTSL 2 BASIC9.45□□□□□ -0.9
Trim35Q8C006 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC9.45□□□□□ -0.9
Trim35Q8C006 Pde4b-201ENSMUST00000030251 1923 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Mitf-207ENSMUST00000203884 2113 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm15204-201ENSMUST00000119454 2281 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms