Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm37022-201ENSMUST00000192517 2254 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm45276-201ENSMUST00000209549 1086 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Gm45660-201ENSMUST00000210267 151 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Gm31931-201ENSMUST00000219666 222 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PrkdcP97313 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm13738-201ENSMUST00000122437 469 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm37376-201ENSMUST00000192176 453 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Gm38015-201ENSMUST00000193048 188 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 AC079644.3-201ENSMUST00000222452 357 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Gm18247-201ENSMUST00000222937 601 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 AC154755.1-201ENSMUST00000225244 537 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 AC161383.1-201ENSMUST00000227356 527 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Clec2j-201ENSMUST00000032517 515 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm43187-201ENSMUST00000200652 2397 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm37121-201ENSMUST00000192219 2556 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm14745-201ENSMUST00000118480 1096 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Gm12402-201ENSMUST00000120536 334 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Gm23891-201ENSMUST00000158114 138 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm37758-201ENSMUST00000194275 629 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PrkdcP97313 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PrkdcP97313 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Nek6-201ENSMUST00000054234 10338 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm4973-201ENSMUST00000206925 1334 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm10693-201ENSMUST00000144146 2037 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC4.36□□□□□ -1.71
PrkdcP97313 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PrkdcP97313 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.36□□□□□ -1.71
PrkdcP97313 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
PrkdcP97313 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms