Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Gm29376-201ENSMUST00000189357 835 ntBASIC6.74□□□□□ -1.33
HttP42859 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.74□□□□□ -1.33
HttP42859 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HttP42859 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HttP42859 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HttP42859 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Gm42866-201ENSMUST00000195919 3304 ntBASIC6.74□□□□□ -1.33
HttP42859 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.74□□□□□ -1.33
HttP42859 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HttP42859 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
HttP42859 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.73□□□□□ -1.33
HttP42859 Gm25383-201ENSMUST00000157810 144 ntBASIC6.73□□□□□ -1.33
HttP42859 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Gm43018-201ENSMUST00000198075 1275 ntBASIC6.73□□□□□ -1.33
HttP42859 Gm42452-201ENSMUST00000199749 617 ntBASIC6.73□□□□□ -1.33
HttP42859 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.73□□□□□ -1.33
HttP42859 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HttP42859 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HttP42859 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.73□□□□□ -1.33
HttP42859 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
HttP42859 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.73□□□□□ -1.33
HttP42859 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Gm14115-201ENSMUST00000119242 482 ntBASIC6.73□□□□□ -1.33
HttP42859 Gm16285-201ENSMUST00000162999 347 ntBASIC6.73□□□□□ -1.33
HttP42859 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.73□□□□□ -1.33
HttP42859 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Gm4548-201ENSMUST00000208487 509 ntBASIC6.73□□□□□ -1.33
HttP42859 Gm20368-201ENSMUST00000220716 301 ntBASIC6.73□□□□□ -1.33
HttP42859 AC164883.2-201ENSMUST00000227931 3815 ntBASIC6.73□□□□□ -1.33
HttP42859 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HttP42859 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HttP42859 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HttP42859 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HttP42859 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HttP42859 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HttP42859 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HttP42859 Gm37109-201ENSMUST00000195475 2254 ntBASIC6.72□□□□□ -1.33
HttP42859 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Gm24741-201ENSMUST00000158857 106 ntBASIC6.72□□□□□ -1.33
HttP42859 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.72□□□□□ -1.33
HttP42859 Gm7890-201ENSMUST00000204877 601 ntBASIC6.72□□□□□ -1.33
HttP42859 Gm17918-201ENSMUST00000205315 574 ntBASIC6.72□□□□□ -1.33
HttP42859 Gm19900-201ENSMUST00000207285 576 ntBASIC6.72□□□□□ -1.33
HttP42859 Gm45276-201ENSMUST00000209549 1086 ntBASIC6.72□□□□□ -1.33
HttP42859 Gm17997-201ENSMUST00000211801 840 ntBASIC6.72□□□□□ -1.33
HttP42859 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HttP42859 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HttP42859 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HttP42859 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HttP42859 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.72□□□□□ -1.33
HttP42859 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
HttP42859 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC6.72□□□□□ -1.33
HttP42859 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
HttP42859 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.72□□□□□ -1.33
HttP42859 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HttP42859 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HttP42859 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Gm24886-201ENSMUST00000104384 123 ntBASIC6.72□□□□□ -1.33
HttP42859 Gm13224-201ENSMUST00000119586 94 ntBASIC6.72□□□□□ -1.33
HttP42859 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HttP42859 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.72□□□□□ -1.33
HttP42859 Gm5119-201ENSMUST00000215858 634 ntBASIC6.72□□□□□ -1.33
HttP42859 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC6.72□□□□□ -1.33
HttP42859 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HttP42859 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC6.72□□□□□ -1.33
HttP42859 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HttP42859 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms