Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm37278-201ENSMUST00000191619 2872 ntBASIC5.88□□□□□ -1.47
P20040 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
P20040 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
P20040 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
P20040 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
P20040 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
P20040 Gm37142-201ENSMUST00000193718 3110 ntBASIC5.88□□□□□ -1.47
P20040 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC5.88□□□□□ -1.47
P20040 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.88□□□□□ -1.47
P20040 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC5.88□□□□□ -1.47
P20040 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
P20040 Mir760-201ENSMUST00000103257 119 ntBASIC5.88□□□□□ -1.47
P20040 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
P20040 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC5.88□□□□□ -1.47
P20040 Gm15310-201ENSMUST00000117891 372 ntBASIC5.88□□□□□ -1.47
P20040 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC5.88□□□□□ -1.47
P20040 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
P20040 Gm22728-201ENSMUST00000158087 129 ntBASIC5.88□□□□□ -1.47
P20040 Gm17217-201ENSMUST00000166613 469 ntBASIC5.88□□□□□ -1.47
P20040 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
P20040 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.88□□□□□ -1.47
P20040 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
P20040 Gm5244-202ENSMUST00000189517 743 ntBASIC5.88□□□□□ -1.47
P20040 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC5.88□□□□□ -1.47
P20040 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.88□□□□□ -1.47
P20040 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC5.88□□□□□ -1.47
P20040 Gm43157-201ENSMUST00000198223 412 ntBASIC5.88□□□□□ -1.47
P20040 Gm43203-201ENSMUST00000200130 558 ntBASIC5.88□□□□□ -1.47
P20040 AC099934.1-201ENSMUST00000200493 79 ntBASIC5.88□□□□□ -1.47
P20040 Gm45514-201ENSMUST00000211531 689 ntBASIC5.88□□□□□ -1.47
P20040 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
P20040 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC5.88□□□□□ -1.47
P20040 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC5.88□□□□□ -1.47
P20040 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC5.88□□□□□ -1.47
P20040 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC5.88□□□□□ -1.47
P20040 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC5.88□□□□□ -1.47
P20040 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC5.88□□□□□ -1.47
P20040 AC161275.1-201ENSMUST00000224668 208 ntBASIC5.88□□□□□ -1.47
P20040 AC124450.1-201ENSMUST00000225569 495 ntBASIC5.88□□□□□ -1.47
P20040 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
P20040 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
P20040 Mir296-201ENSMUST00000083587 79 ntBASIC5.88□□□□□ -1.47
P20040 Gm6419-201ENSMUST00000097166 429 ntBASIC5.88□□□□□ -1.47
P20040 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
P20040 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
P20040 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
P20040 AC162301.1-201ENSMUST00000228785 1542 ntBASIC5.88□□□□□ -1.47
P20040 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
P20040 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
P20040 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.88□□□□□ -1.47
P20040 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
P20040 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
P20040 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
P20040 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
P20040 AC093022.3-201ENSMUST00000226569 1926 ntBASIC5.87□□□□□ -1.47
P20040 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Gm42763-201ENSMUST00000199595 2087 ntBASIC5.87□□□□□ -1.47
P20040 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.87□□□□□ -1.47
P20040 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.87□□□□□ -1.47
P20040 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
P20040 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
P20040 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Thap6-201ENSMUST00000191860 3151 ntBASIC5.87□□□□□ -1.47
P20040 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.87□□□□□ -1.47
P20040 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
P20040 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
P20040 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
P20040 Gm25724-201ENSMUST00000104531 117 ntBASIC5.87□□□□□ -1.47
P20040 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.87□□□□□ -1.47
P20040 Gm13732-201ENSMUST00000117753 535 ntBASIC5.87□□□□□ -1.47
P20040 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.87□□□□□ -1.47
P20040 Gm11581-201ENSMUST00000122024 763 ntBASIC5.87□□□□□ -1.47
P20040 Gm13724-201ENSMUST00000122395 1155 ntBASIC5.87□□□□□ -1.47
P20040 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC5.87□□□□□ -1.47
P20040 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC5.87□□□□□ -1.47
P20040 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC5.87□□□□□ -1.47
P20040 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
P20040 Gm27360-201ENSMUST00000183487 80 ntBASIC5.87□□□□□ -1.47
P20040 Mir7033-201ENSMUST00000184259 81 ntBASIC5.87□□□□□ -1.47
P20040 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.87□□□□□ -1.47
P20040 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Gm37883-201ENSMUST00000194970 725 ntBASIC5.87□□□□□ -1.47
P20040 Gm43546-201ENSMUST00000196721 943 ntBASIC5.87□□□□□ -1.47
P20040 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.87□□□□□ -1.47
P20040 Gm42713-201ENSMUST00000202709 945 ntBASIC5.87□□□□□ -1.47
P20040 Gm17822-201ENSMUST00000204307 351 ntBASIC5.87□□□□□ -1.47
P20040 Gm45136-201ENSMUST00000205793 943 ntBASIC5.87□□□□□ -1.47
P20040 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms