Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxd3P09027 AC113304.1-201ENSMUST00000214014 1833 ntTSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gata4-203ENSMUST00000121312 2407 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Foxp3-202ENSMUST00000115738 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm1982-201ENSMUST00000188615 1887 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm5442-201ENSMUST00000202121 2034 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Nt5dc1-201ENSMUST00000047885 2743 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Eif4enif1-201ENSMUST00000020734 3565 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Rpap3-ps2-201ENSMUST00000184741 2161 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.47□□□□□ -1.37
Hoxd3P09027 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Orc1-201ENSMUST00000102744 3014 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Dlg2-202ENSMUST00000098308 2329 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxd3P09027 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Hoxd3P09027 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Hoxd3P09027 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
Hoxd3P09027 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Hoxd3P09027 Gm3822-201ENSMUST00000201941 2935 ntBASIC6.46□□□□□ -1.37
Hoxd3P09027 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Hoxd3P09027 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Hoxd3P09027 Aldh3b3-202ENSMUST00000179433 3827 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Hoxd3P09027 Ints14-202ENSMUST00000170517 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Hoxd3P09027 C79130-201ENSMUST00000199610 4296 ntBASIC6.46□□□□□ -1.37
Hoxd3P09027 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Hoxd3P09027 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Hoxd3P09027 Gm13340-201ENSMUST00000117219 1545 ntBASIC6.46□□□□□ -1.37
Hoxd3P09027 Pnma2-202ENSMUST00000122431 3143 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Hoxd3P09027 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
Hoxd3P09027 Npr3-204ENSMUST00000228489 1969 ntBASIC6.46□□□□□ -1.37
Hoxd3P09027 St6gal1-206ENSMUST00000178797 4177 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Hoxd3P09027 Opn1sw-201ENSMUST00000080428 2410 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hoxd3P09027 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hoxd3P09027 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm11207-201ENSMUST00000117824 414 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm13679-201ENSMUST00000118678 484 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm11484-201ENSMUST00000119808 338 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm17044-201ENSMUST00000168549 828 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm17051-201ENSMUST00000170787 487 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm6695-201ENSMUST00000177264 1172 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm27957-201ENSMUST00000184054 127 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Mir496b-201ENSMUST00000184935 113 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC6.46□□□□□ -1.38
Hoxd3P09027 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm38110-201ENSMUST00000194594 1551 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm43287-201ENSMUST00000197747 600 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm43247-201ENSMUST00000198638 481 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hoxd3P09027 Zfp180-202ENSMUST00000203854 3845 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Hoxd3P09027 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm7203-201ENSMUST00000210880 1404 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.46□□□□□ -1.38
Hoxd3P09027 AC156273.1-201ENSMUST00000214570 2762 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Mgam2-ps-203ENSMUST00000216691 1709 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC6.46□□□□□ -1.38
Hoxd3P09027 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC6.46□□□□□ -1.38
Hoxd3P09027 AC123058.1-201ENSMUST00000223748 437 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 AC147044.1-201ENSMUST00000223850 552 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 AC131747.1-201ENSMUST00000226159 793 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 AC170810.3-201ENSMUST00000226177 374 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 AC166344.2-201ENSMUST00000226747 374 ntBASIC6.46□□□□□ -1.38
Hoxd3P09027 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms