Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
P01852 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.17□□□□□ -1.42
P01852 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.17□□□□□ -1.42
P01852 Gm22636-201ENSMUST00000158142 275 ntBASIC6.17□□□□□ -1.42
P01852 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.17□□□□□ -1.42
P01852 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.17□□□□□ -1.42
P01852 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
P01852 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
P01852 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
P01852 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
P01852 Gm8609-201ENSMUST00000182967 998 ntBASIC6.17□□□□□ -1.42
P01852 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
P01852 Gm42673-201ENSMUST00000202676 337 ntBASIC6.17□□□□□ -1.42
P01852 Gm8479-201ENSMUST00000203825 718 ntBASIC6.17□□□□□ -1.42
P01852 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.17□□□□□ -1.42
P01852 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.17□□□□□ -1.42
P01852 Gm5418-201ENSMUST00000206932 528 ntBASIC6.17□□□□□ -1.42
P01852 Gm44892-201ENSMUST00000208595 488 ntBASIC6.17□□□□□ -1.42
P01852 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.17□□□□□ -1.42
P01852 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.17□□□□□ -1.42
P01852 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.17□□□□□ -1.42
P01852 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.17□□□□□ -1.42
P01852 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.17□□□□□ -1.42
P01852 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.17□□□□□ -1.42
P01852 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.17□□□□□ -1.42
P01852 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.17□□□□□ -1.42
P01852 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
P01852 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Gm15500-201ENSMUST00000071523 894 ntBASIC6.17□□□□□ -1.42
P01852 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
P01852 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Gm25587-201ENSMUST00000082498 166 ntBASIC6.17□□□□□ -1.42
P01852 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.17□□□□□ -1.42
P01852 Mir106b-201ENSMUST00000083580 82 ntBASIC6.17□□□□□ -1.42
P01852 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
P01852 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
P01852 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
P01852 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
P01852 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P01852 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
P01852 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
P01852 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
P01852 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.16□□□□□ -1.42
P01852 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.16□□□□□ -1.42
P01852 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.16□□□□□ -1.42
P01852 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
P01852 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
P01852 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.16□□□□□ -1.42
P01852 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
P01852 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.16□□□□□ -1.42
P01852 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
P01852 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
P01852 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.16□□□□□ -1.42
P01852 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.16□□□□□ -1.42
P01852 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
P01852 Gm2178-201ENSMUST00000104927 357 ntBASIC6.16□□□□□ -1.42
P01852 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
P01852 Snord88a-201ENSMUST00000116723 90 ntBASIC6.16□□□□□ -1.42
P01852 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
P01852 Gm11501-201ENSMUST00000118039 581 ntBASIC6.16□□□□□ -1.42
P01852 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.16□□□□□ -1.42
P01852 Gm25722-201ENSMUST00000157498 279 ntBASIC6.16□□□□□ -1.42
P01852 Gm24176-201ENSMUST00000158928 121 ntBASIC6.16□□□□□ -1.42
P01852 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
P01852 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.16□□□□□ -1.42
P01852 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.16□□□□□ -1.42
P01852 Gm27762-201ENSMUST00000183417 109 ntBASIC6.16□□□□□ -1.42
P01852 Gm28117-201ENSMUST00000188472 371 ntBASIC6.16□□□□□ -1.42
P01852 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
P01852 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.16□□□□□ -1.42
P01852 Gm21054-201ENSMUST00000203981 380 ntBASIC6.16□□□□□ -1.42
P01852 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
P01852 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.16□□□□□ -1.42
P01852 AC073947.1-201ENSMUST00000216991 649 ntBASIC6.16□□□□□ -1.42
P01852 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.16□□□□□ -1.42
P01852 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC6.16□□□□□ -1.42
P01852 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.16□□□□□ -1.42
P01852 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC6.16□□□□□ -1.42
P01852 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.16□□□□□ -1.42
P01852 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.16□□□□□ -1.42
P01852 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
P01852 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms