Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm15125-201ENSMUST00000116185 800 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm13195-201ENSMUST00000117229 261 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm12817-201ENSMUST00000119622 610 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm11203-201ENSMUST00000122169 741 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm22024-201ENSMUST00000122733 287 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm23740-201ENSMUST00000157385 100 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm24768-201ENSMUST00000158512 94 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm16027-201ENSMUST00000161618 758 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm27542-201ENSMUST00000184184 256 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm5147-201ENSMUST00000185999 794 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm28573-201ENSMUST00000187821 380 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm28400-201ENSMUST00000191332 380 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm37506-201ENSMUST00000192008 143 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm42431-201ENSMUST00000196880 323 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm42976-201ENSMUST00000200313 222 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm44212-201ENSMUST00000205016 897 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm45454-201ENSMUST00000211484 455 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Rpl32l-201ENSMUST00000216127 399 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 CT573422.1-201ENSMUST00000216655 405 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 AC192616.3-201ENSMUST00000220797 1124 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh1F7BJK1 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms