Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm26422-201ENSMUST00000104276 132 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm15616-201ENSMUST00000118662 375 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm23071-201ENSMUST00000158242 115 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm37439-201ENSMUST00000193150 856 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm9517-201ENSMUST00000195021 874 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.37□□□□□ -1.39
Upk3aQ9JKX8 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm25877-201ENSMUST00000104326 129 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm24888-201ENSMUST00000104387 130 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm15186-201ENSMUST00000119345 563 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm23426-201ENSMUST00000122483 318 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm25057-201ENSMUST00000157366 88 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm25675-201ENSMUST00000174979 118 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm28064-201ENSMUST00000185639 858 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm18447-201ENSMUST00000187501 307 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm42799-201ENSMUST00000201331 328 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm18586-201ENSMUST00000217265 518 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm28392-201ENSMUST00000077630 393 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upk3aQ9JKX8 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm15216-201ENSMUST00000118058 277 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm11504-201ENSMUST00000120211 173 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms