Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm42519-201ENSMUST00000199282 3656 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm14802-201ENSMUST00000121944 1885 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm43331-201ENSMUST00000197991 1689 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 AC122346.2-201ENSMUST00000224326 2931 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm15578-201ENSMUST00000117320 475 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm15596-201ENSMUST00000121139 784 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm11609-201ENSMUST00000121926 793 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm25120-201ENSMUST00000180148 79 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm42720-201ENSMUST00000196813 300 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm5995-201ENSMUST00000204107 1273 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm44212-201ENSMUST00000205016 897 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 AC133948.2-201ENSMUST00000217850 378 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 AC192091.1-201ENSMUST00000218668 439 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 AC155709.1-201ENSMUST00000218794 162 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 AC144783.1-201ENSMUST00000219103 960 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm2754-201ENSMUST00000223383 589 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 AC117797.2-201ENSMUST00000224419 531 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 CT010480.3-201ENSMUST00000224712 259 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Anxa13-202ENSMUST00000227274 1201 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 AC158981.2-201ENSMUST00000227565 1537 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm26645-201ENSMUST00000181076 1316 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Gm37151-201ENSMUST00000194631 5007 ntBASIC7□□□□□ -1.29
Nkx6-1Q99MA9 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nkx6-1Q99MA9 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm44802-201ENSMUST00000208026 1916 ntBASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm8421-201ENSMUST00000119439 305 ntBASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm11891-201ENSMUST00000121241 619 ntBASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm15534-201ENSMUST00000137642 562 ntBASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm24363-201ENSMUST00000158440 311 ntBASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Mir6241-201ENSMUST00000184225 103 ntBASIC6.99□□□□□ -1.29
Nkx6-1Q99MA9 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms