Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm43168-201ENSMUST00000201039 1612 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Gm15913-201ENSMUST00000118492 331 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 BC002163-201ENSMUST00000121906 319 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Gm23891-201ENSMUST00000158114 138 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Gm26197-201ENSMUST00000175033 115 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Gm18033-201ENSMUST00000186678 550 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Gm18351-201ENSMUST00000188646 883 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Gm43694-201ENSMUST00000200773 1119 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 AC171206.1-201ENSMUST00000213612 213 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 AC102689.1-201ENSMUST00000220511 1090 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 AC140208.1-201ENSMUST00000226609 285 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 AC169985.1-201ENSMUST00000223648 2439 ntBASIC7.99□□□□□ -1.13
Ccdc9Q8VC31 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm12365-201ENSMUST00000117931 568 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm5270-201ENSMUST00000121506 1002 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm15152-201ENSMUST00000121540 394 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm15079-201ENSMUST00000121943 216 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm14251-201ENSMUST00000122133 279 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm22795-201ENSMUST00000157233 118 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm24186-201ENSMUST00000157983 127 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm4613-201ENSMUST00000165488 276 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm2951-201ENSMUST00000169447 490 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Mir6340-201ENSMUST00000183857 119 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm29385-201ENSMUST00000186831 363 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm43874-201ENSMUST00000204853 2798 ntBASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
Ccdc9Q8VC31 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm14509-201ENSMUST00000117312 1286 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm16248-201ENSMUST00000124238 243 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm24530-201ENSMUST00000157948 288 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm17121-201ENSMUST00000170414 847 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm17222-201ENSMUST00000180135 847 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Mir7685-201ENSMUST00000183555 62 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm6546-201ENSMUST00000192096 766 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms