Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm11760-201ENSMUST00000122355 796 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm26102-201ENSMUST00000157251 284 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm22943-201ENSMUST00000158564 76 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm16560-201ENSMUST00000159115 404 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 4921509A06Rik-201ENSMUST00000171278 392 ntTSL 3 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm17748-201ENSMUST00000177906 522 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Mir6981-201ENSMUST00000184293 115 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm29451-201ENSMUST00000188862 696 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm28123-201ENSMUST00000189725 696 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm5190-201ENSMUST00000192434 357 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm5990-201ENSMUST00000203126 746 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm44258-201ENSMUST00000204925 301 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm18471-201ENSMUST00000208272 452 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm25579-201ENSMUST00000083407 106 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm5507-201ENSMUST00000091897 1008 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Lancl1-201ENSMUST00000027149 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Tomm40l-201ENSMUST00000005817 4712 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Mid1-205ENSMUST00000112105 3974 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Cln3-202ENSMUST00000084589 3203 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Tead4-203ENSMUST00000130454 1718 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm15229-201ENSMUST00000146636 1398 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Wdr5b-201ENSMUST00000042203 1784 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Fbxo34-202ENSMUST00000095941 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Tgm5-201ENSMUST00000028721 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Ndufs1-201ENSMUST00000027111 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm37120-201ENSMUST00000193350 5959 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gm11855-201ENSMUST00000121562 1869 ntBASIC9.47□□□□□ -0.89
Trim35Q8C006 Gpkow-201ENSMUST00000049896 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Olfr531-202ENSMUST00000216053 2330 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trim35Q8C006 Nol11-201ENSMUST00000018577 3158 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim35Q8C006 Uspl1-204ENSMUST00000119685 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim35Q8C006 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Trim35Q8C006 Ccdc38-201ENSMUST00000092215 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim35Q8C006 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim35Q8C006 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC9.46□□□□□ -0.89
Trim35Q8C006 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
Trim35Q8C006 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Trim35Q8C006 Slc4a2-203ENSMUST00000115049 3924 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Trim35Q8C006 C330007P06Rik-201ENSMUST00000047486 3467 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim35Q8C006 D230017M19Rik-203ENSMUST00000181973 1649 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trim35Q8C006 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trim35Q8C006 Lipc-204ENSMUST00000216798 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim35Q8C006 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm22777-201ENSMUST00000104091 129 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm14628-201ENSMUST00000117508 635 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm14865-201ENSMUST00000117523 494 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm11501-201ENSMUST00000118039 581 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm13222-201ENSMUST00000119638 138 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm14034-201ENSMUST00000120147 551 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm13788-201ENSMUST00000120767 601 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 n-R5s154-201ENSMUST00000122513 108 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Ear-ps7-201ENSMUST00000161287 442 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm4761-201ENSMUST00000178086 582 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm26379-201ENSMUST00000178125 138 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm4823-201ENSMUST00000181990 984 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm9578-201ENSMUST00000182354 753 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm27500-201ENSMUST00000184331 336 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Trav9n-1-201ENSMUST00000185224 339 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm29784-201ENSMUST00000196217 406 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Upp1-201ENSMUST00000020677 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim35Q8C006 Tmem147-207ENSMUST00000209065 727 ntTSL 2 BASIC9.46□□□□□ -0.9
Trim35Q8C006 Gm45879-201ENSMUST00000212521 392 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 AC140409.1-201ENSMUST00000213907 457 ntTSL 3 BASIC9.46□□□□□ -0.9
Trim35Q8C006 AC164567.2-201ENSMUST00000219363 445 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 AC154788.1-201ENSMUST00000225003 340 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Trim35Q8C006 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trim35Q8C006 AC158122.1-201ENSMUST00000227398 673 ntBASIC9.46□□□□□ -0.9
Trim35Q8C006 Fgfbp1-201ENSMUST00000061299 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms