Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.76□□□□□ -1.33
HttP42859 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HttP42859 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HttP42859 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HttP42859 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
HttP42859 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Gm13998-201ENSMUST00000120952 335 ntBASIC6.75□□□□□ -1.33
HttP42859 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.75□□□□□ -1.33
HttP42859 Gm37631-201ENSMUST00000192275 364 ntBASIC6.75□□□□□ -1.33
HttP42859 Gm45596-201ENSMUST00000209279 434 ntBASIC6.75□□□□□ -1.33
HttP42859 Gm2225-201ENSMUST00000209570 377 ntBASIC6.75□□□□□ -1.33
HttP42859 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.75□□□□□ -1.33
HttP42859 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.75□□□□□ -1.33
HttP42859 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HttP42859 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.75□□□□□ -1.33
HttP42859 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.75□□□□□ -1.33
HttP42859 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
HttP42859 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
HttP42859 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
HttP42859 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.75□□□□□ -1.33
HttP42859 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
HttP42859 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
HttP42859 Gm14783-201ENSMUST00000118900 663 ntBASIC6.75□□□□□ -1.33
HttP42859 Gm20926-201ENSMUST00000194457 696 ntBASIC6.75□□□□□ -1.33
HttP42859 Gm44382-201ENSMUST00000198683 122 ntBASIC6.75□□□□□ -1.33
HttP42859 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.75□□□□□ -1.33
HttP42859 Gm25147-201ENSMUST00000083030 105 ntBASIC6.75□□□□□ -1.33
HttP42859 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HttP42859 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HttP42859 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
HttP42859 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HttP42859 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.75□□□□□ -1.33
HttP42859 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC6.75□□□□□ -1.33
HttP42859 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
HttP42859 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.75□□□□□ -1.33
HttP42859 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.74□□□□□ -1.33
HttP42859 Gm8032-201ENSMUST00000171009 574 ntBASIC6.74□□□□□ -1.33
HttP42859 Gm42799-201ENSMUST00000201331 328 ntBASIC6.74□□□□□ -1.33
HttP42859 Gm8942-201ENSMUST00000217892 400 ntBASIC6.74□□□□□ -1.33
HttP42859 Gm17165-201ENSMUST00000096155 493 ntBASIC6.74□□□□□ -1.33
HttP42859 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.74□□□□□ -1.33
HttP42859 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HttP42859 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HttP42859 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.74□□□□□ -1.33
HttP42859 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HttP42859 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
HttP42859 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HttP42859 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.74□□□□□ -1.33
HttP42859 Gm42961-201ENSMUST00000202023 181 ntBASIC6.74□□□□□ -1.33
HttP42859 Gm38840-201ENSMUST00000204716 843 ntBASIC6.74□□□□□ -1.33
HttP42859 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.74□□□□□ -1.33
HttP42859 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.74□□□□□ -1.33
HttP42859 Gm18413-201ENSMUST00000221573 655 ntBASIC6.74□□□□□ -1.33
HttP42859 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.74□□□□□ -1.33
HttP42859 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.74□□□□□ -1.33
HttP42859 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HttP42859 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
HttP42859 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HttP42859 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HttP42859 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.74□□□□□ -1.33
HttP42859 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.74□□□□□ -1.33
HttP42859 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
HttP42859 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HttP42859 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms