Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm44228-201ENSMUST00000204888 2026 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cdx1P18111 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Cdx1P18111 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Cdx1P18111 Gm13768-201ENSMUST00000116469 929 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm14509-201ENSMUST00000117312 1286 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm13521-201ENSMUST00000118922 866 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm15481-201ENSMUST00000120264 539 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm13877-201ENSMUST00000120614 417 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm14065-201ENSMUST00000120848 585 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm5578-201ENSMUST00000121490 1236 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC5.49□□□□□ -1.53
Cdx1P18111 Olfr331-202ENSMUST00000170501 957 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm27018-201ENSMUST00000181136 225 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm18848-201ENSMUST00000182069 792 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm27001-201ENSMUST00000182252 936 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 Gm18875-201ENSMUST00000188563 882 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC5.49□□□□□ -1.53
Cdx1P18111 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm22897-202ENSMUST00000197782 127 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.49□□□□□ -1.53
Cdx1P18111 Gm19764-201ENSMUST00000203630 649 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm44590-201ENSMUST00000206161 391 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm45198-201ENSMUST00000206796 591 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm45925-202ENSMUST00000219904 1136 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Gm5791-201ENSMUST00000220840 489 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 AC124510.2-201ENSMUST00000221958 683 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 CT030705.2-201ENSMUST00000225301 556 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 AC158981.1-201ENSMUST00000226943 1205 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cdx1P18111 Mir138-2-201ENSMUST00000083578 71 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cdx1P18111 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
Cdx1P18111 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cdx1P18111 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Cdx1P18111 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Cdx1P18111 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Cdx1P18111 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cdx1P18111 Gm25396-201ENSMUST00000103981 133 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Gm5228-201ENSMUST00000117186 357 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm11810-201ENSMUST00000118311 333 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm15778-201ENSMUST00000118469 608 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm13525-201ENSMUST00000120607 478 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm11726-201ENSMUST00000121028 424 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm12094-201ENSMUST00000121781 472 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm22636-201ENSMUST00000158142 275 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC5.48□□□□□ -1.53
Cdx1P18111 Gm22698-201ENSMUST00000175375 108 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.48□□□□□ -1.53
Cdx1P18111 Gm26179-201ENSMUST00000177723 132 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Cdx1P18111 Gm26729-201ENSMUST00000180744 352 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Mir6987-201ENSMUST00000184789 73 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm18350-201ENSMUST00000187395 955 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC5.48□□□□□ -1.53
Cdx1P18111 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC5.48□□□□□ -1.53
Cdx1P18111 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 204.4 ms