Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lire1P11260 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.64□□□□□ -1.35
Lire1P11260 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.64□□□□□ -1.35
Lire1P11260 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Lire1P11260 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Lire1P11260 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Lire1P11260 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.64□□□□□ -1.35
Lire1P11260 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lire1P11260 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Lire1P11260 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lire1P11260 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Lire1P11260 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lire1P11260 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.64□□□□□ -1.35
Lire1P11260 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lire1P11260 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Lire1P11260 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lire1P11260 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Lire1P11260 Mir466i-201ENSMUST00000116924 121 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm14279-201ENSMUST00000117142 332 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm10243-201ENSMUST00000117571 333 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm12307-201ENSMUST00000120581 590 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm5135-201ENSMUST00000121100 573 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm12754-201ENSMUST00000121908 454 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm11895-201ENSMUST00000122165 467 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Lire1P11260 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.63□□□□□ -1.35
Lire1P11260 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Gm26784-201ENSMUST00000181666 410 ntBASIC6.63□□□□□ -1.35
Lire1P11260 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Gm5050-201ENSMUST00000197164 775 ntBASIC6.63□□□□□ -1.35
Lire1P11260 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC6.63□□□□□ -1.35
Lire1P11260 Gm43396-201ENSMUST00000197506 706 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.63□□□□□ -1.35
Lire1P11260 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm45042-201ENSMUST00000207377 211 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
Lire1P11260 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.63□□□□□ -1.35
Lire1P11260 Gm45506-201ENSMUST00000211620 280 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC6.63□□□□□ -1.35
Lire1P11260 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.63□□□□□ -1.35
Lire1P11260 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.63□□□□□ -1.35
Lire1P11260 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Gm5250-201ENSMUST00000059065 321 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Gm10247-201ENSMUST00000090395 333 ntBASIC6.63□□□□□ -1.35
Lire1P11260 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Lire1P11260 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lire1P11260 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Lire1P11260 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Lire1P11260 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.62□□□□□ -1.35
Lire1P11260 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms