Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm13604-201ENSMUST00000119332 482 ntBASIC7.99□□□□□ -1.13
Col4a1P02463 Gm25433-201ENSMUST00000158283 286 ntBASIC7.99□□□□□ -1.13
Col4a1P02463 Gm8524-201ENSMUST00000186232 379 ntBASIC7.99□□□□□ -1.13
Col4a1P02463 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.99□□□□□ -1.13
Col4a1P02463 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.99□□□□□ -1.13
Col4a1P02463 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col4a1P02463 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC7.99□□□□□ -1.13
Col4a1P02463 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col4a1P02463 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.99□□□□□ -1.13
Col4a1P02463 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.99□□□□□ -1.13
Col4a1P02463 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col4a1P02463 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.99□□□□□ -1.13
Col4a1P02463 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col4a1P02463 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col4a1P02463 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.99□□□□□ -1.13
Col4a1P02463 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Col4a1P02463 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Col4a1P02463 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col4a1P02463 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col4a1P02463 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.99□□□□□ -1.13
Col4a1P02463 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col4a1P02463 Gm42692-201ENSMUST00000199482 2833 ntBASIC7.99□□□□□ -1.13
Col4a1P02463 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC7.99□□□□□ -1.13
Col4a1P02463 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
Col4a1P02463 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col4a1P02463 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col4a1P02463 Mir700-201ENSMUST00000102169 79 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 Gm13137-201ENSMUST00000118035 345 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 Gm7931-201ENSMUST00000121537 271 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 Gm12618-201ENSMUST00000121754 483 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 Gm27854-201ENSMUST00000175578 244 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col4a1P02463 Gm45026-201ENSMUST00000205292 833 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 A1cf-203ENSMUST00000224400 1204 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Col4a1P02463 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.98□□□□□ -1.13
Col4a1P02463 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Col4a1P02463 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col4a1P02463 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
Col4a1P02463 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col4a1P02463 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Col4a1P02463 Gm25795-201ENSMUST00000104421 132 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 Gm14098-201ENSMUST00000119295 623 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 Gm5306-201ENSMUST00000203325 757 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 Gm19653-201ENSMUST00000204326 1039 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.98□□□□□ -1.13
Col4a1P02463 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 AC122393.2-201ENSMUST00000226404 1093 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 AC159979.1-201ENSMUST00000227927 342 ntBASIC7.98□□□□□ -1.13
Col4a1P02463 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Col4a1P02463 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Col4a1P02463 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Col4a1P02463 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a1P02463 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Col4a1P02463 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col4a1P02463 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a1P02463 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a1P02463 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a1P02463 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a1P02463 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a1P02463 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Col4a1P02463 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.97□□□□□ -1.13
Col4a1P02463 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a1P02463 Gm8582-201ENSMUST00000164061 789 ntBASIC7.97□□□□□ -1.13
Col4a1P02463 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.97□□□□□ -1.13
Col4a1P02463 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.97□□□□□ -1.13
Col4a1P02463 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.97□□□□□ -1.13
Col4a1P02463 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Col4a1P02463 Gm5514-201ENSMUST00000060477 306 ntBASIC7.97□□□□□ -1.13
Col4a1P02463 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a1P02463 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a1P02463 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Col4a1P02463 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.97□□□□□ -1.13
Col4a1P02463 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.97□□□□□ -1.13
Col4a1P02463 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a1P02463 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Col4a1P02463 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC7.97□□□□□ -1.13
Col4a1P02463 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.97□□□□□ -1.13
Col4a1P02463 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.97□□□□□ -1.13
Col4a1P02463 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a1P02463 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a1P02463 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Col4a1P02463 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col4a1P02463 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col4a1P02463 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms