Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.37□□□□□ -1.39
Col6a3E9PWQ3 Rnu3a-202ENSMUST00000196710 213 ntBASIC6.37□□□□□ -1.39
Col6a3E9PWQ3 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.37□□□□□ -1.39
Col6a3E9PWQ3 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.37□□□□□ -1.39
Col6a3E9PWQ3 Gm10095-201ENSMUST00000222765 483 ntBASIC6.37□□□□□ -1.39
Col6a3E9PWQ3 Rnu3a-201ENSMUST00000083936 214 ntBASIC6.37□□□□□ -1.39
Col6a3E9PWQ3 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a3E9PWQ3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm12077-201ENSMUST00000117049 364 ntBASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm7363-201ENSMUST00000119883 399 ntBASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm38254-201ENSMUST00000192276 1009 ntBASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm11805-201ENSMUST00000121238 600 ntBASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.36□□□□□ -1.39
Col6a3E9PWQ3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm15016-201ENSMUST00000117300 720 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm15209-201ENSMUST00000117703 400 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm14356-201ENSMUST00000118322 869 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm23224-201ENSMUST00000158122 271 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm29113-201ENSMUST00000185991 3432 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 AC154788.1-201ENSMUST00000225003 340 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 AC164883.2-201ENSMUST00000227931 3815 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm10064-201ENSMUST00000071235 399 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm24160-201ENSMUST00000104594 126 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm2607-201ENSMUST00000212389 627 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Col6a3E9PWQ3 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 133.3 ms