Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm20615-201ENSMUST00000177503 705 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm37322-201ENSMUST00000193409 337 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm4012-201ENSMUST00000221504 581 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm22426-201ENSMUST00000103811 96 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Rnu11-201ENSMUST00000104135 134 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm26289-201ENSMUST00000104169 131 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm5793-201ENSMUST00000119393 630 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm14614-201ENSMUST00000119873 384 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm11581-201ENSMUST00000122024 763 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm3351-201ENSMUST00000193454 505 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm19035-202ENSMUST00000194575 959 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm43555-201ENSMUST00000196588 310 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm44239-201ENSMUST00000204228 271 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm20302-201ENSMUST00000080671 275 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm24473-201ENSMUST00000104483 131 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm7058-201ENSMUST00000119209 902 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm11976-201ENSMUST00000119236 295 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm23539-201ENSMUST00000157537 224 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm20397-201ENSMUST00000174520 362 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm38131-201ENSMUST00000192449 430 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm44312-201ENSMUST00000203536 469 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm18469-201ENSMUST00000208850 439 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 CT030645.2-201ENSMUST00000224321 1012 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 AC129308.1-201ENSMUST00000223800 2309 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a4A2AX52 AC111010.1-203ENSMUST00000227287 1548 ntBASIC5.61□□□□□ -1.51
Col6a4A2AX52 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a4A2AX52 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm26422-201ENSMUST00000104276 132 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm22371-201ENSMUST00000104588 130 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm13890-201ENSMUST00000117578 390 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm14938-201ENSMUST00000119482 943 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms