Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm38840-201ENSMUST00000204716 843 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm6863-201ENSMUST00000052882 636 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PrkdcP97313 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PrkdcP97313 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm37772-201ENSMUST00000191635 1394 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm37953-201ENSMUST00000195293 1884 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm23149-201ENSMUST00000158837 230 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm22932-201ENSMUST00000175510 72 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm8506-201ENSMUST00000186661 829 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm43743-202ENSMUST00000198353 491 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PrkdcP97313 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm37238-201ENSMUST00000195552 2390 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm5832-201ENSMUST00000121704 1582 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PrkdcP97313 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
PrkdcP97313 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
PrkdcP97313 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Arfgef2-201ENSMUST00000099078 8770 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm14175-201ENSMUST00000119835 241 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm24731-201ENSMUST00000158227 131 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm28567-201ENSMUST00000190270 693 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm37044-201ENSMUST00000193531 693 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm9517-201ENSMUST00000195021 874 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm38369-201ENSMUST00000195101 693 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm45596-201ENSMUST00000209279 434 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Mir30b-201ENSMUST00000083542 96 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
PrkdcP97313 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
PrkdcP97313 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC4.39□□□□□ -1.71
PrkdcP97313 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
PrkdcP97313 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
PrkdcP97313 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PrkdcP97313 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.38□□□□□ -1.71
PrkdcP97313 Gm22726-201ENSMUST00000158089 179 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
PrkdcP97313 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
PrkdcP97313 Gm37274-201ENSMUST00000192167 1682 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PrkdcP97313 Gm37403-201ENSMUST00000193775 3521 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PrkdcP97313 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PrkdcP97313 Gm17223-201ENSMUST00000171413 481 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC4.38□□□□□ -1.71
PrkdcP97313 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Gm28507-201ENSMUST00000189737 703 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Gm8920-201ENSMUST00000196153 924 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.38□□□□□ -1.71
PrkdcP97313 Gm2225-201ENSMUST00000209570 377 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Gm33242-201ENSMUST00000212130 1057 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC4.38□□□□□ -1.71
PrkdcP97313 Gm20368-201ENSMUST00000220716 301 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Vmn1r41-202ENSMUST00000226337 888 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms