Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
Cdx2P43241 CT010514.1-201ENSMUST00000214088 2969 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdx2P43241 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdx2P43241 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Gm13578-201ENSMUST00000120849 590 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdx2P43241 Gm16557-201ENSMUST00000159182 191 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Gm38097-201ENSMUST00000192936 439 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Gm2040-201ENSMUST00000202979 289 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdx2P43241 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Gm44809-201ENSMUST00000208305 993 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Gm45734-201ENSMUST00000211916 411 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Gm18914-201ENSMUST00000214625 616 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.42□□□□□ -1.38
Cdx2P43241 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cdx2P43241 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
Cdx2P43241 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cdx2P43241 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cdx2P43241 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.42□□□□□ -1.38
Cdx2P43241 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cdx2P43241 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx2P43241 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx2P43241 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC6.41□□□□□ -1.38
Cdx2P43241 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdx2P43241 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Cdx2P43241 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdx2P43241 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Gm6446-201ENSMUST00000120604 818 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm23740-201ENSMUST00000157385 100 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Gm26162-201ENSMUST00000157793 132 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms