Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC9.88□□□□□ -0.83
Chd1P40201 Mir337-201ENSMUST00000083592 97 ntBASIC9.88□□□□□ -0.83
Chd1P40201 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC9.88□□□□□ -0.83
Chd1P40201 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Gm18880-201ENSMUST00000223333 1541 ntBASIC9.88□□□□□ -0.83
Chd1P40201 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Chd1P40201 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Gm37221-201ENSMUST00000194472 3007 ntBASIC9.88□□□□□ -0.83
Chd1P40201 Gm5832-201ENSMUST00000121704 1582 ntBASIC9.88□□□□□ -0.83
Chd1P40201 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Chd1P40201 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Chd1P40201 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Chd1P40201 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Chd1P40201 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.88□□□□□ -0.83
Chd1P40201 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd1P40201 Gm10693-201ENSMUST00000144146 2037 ntBASIC9.88□□□□□ -0.83
Chd1P40201 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm37376-201ENSMUST00000192176 453 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Chd1P40201 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC9.87□□□□□ -0.83
Chd1P40201 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm6049-201ENSMUST00000222369 458 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Gm10095-201ENSMUST00000222765 483 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Mir27a-201ENSMUST00000083510 87 ntBASIC9.87□□□□□ -0.83
Chd1P40201 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Chd1P40201 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Chd1P40201 Gm36936-201ENSMUST00000194508 2749 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm37548-201ENSMUST00000194519 3814 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Chd1P40201 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm43873-201ENSMUST00000204505 3938 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Chd1P40201 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.87□□□□□ -0.83
Chd1P40201 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Chd1P40201 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Chd1P40201 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm14745-201ENSMUST00000118480 1096 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Gm25013-201ENSMUST00000158402 128 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Gm6541-201ENSMUST00000165542 561 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm20932-201ENSMUST00000189115 694 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Gm43098-201ENSMUST00000199989 1297 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 AC164164.2-201ENSMUST00000221809 785 ntBASIC9.87□□□□□ -0.83
Chd1P40201 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC9.87□□□□□ -0.83
Chd1P40201 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Chd1P40201 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Chd1P40201 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Chd1P40201 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Chd1P40201 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Chd1P40201 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC9.86□□□□□ -0.83
Chd1P40201 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Chd1P40201 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Chd1P40201 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Chd1P40201 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 Gm24989-201ENSMUST00000104461 88 ntBASIC9.86□□□□□ -0.83
Chd1P40201 Gm13579-201ENSMUST00000118519 517 ntBASIC9.86□□□□□ -0.83
Chd1P40201 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 Gm22552-201ENSMUST00000157796 337 ntBASIC9.86□□□□□ -0.83
Chd1P40201 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 Gm3841-201ENSMUST00000191399 451 ntBASIC9.86□□□□□ -0.83
Chd1P40201 AC154556.1-201ENSMUST00000224587 885 ntBASIC9.86□□□□□ -0.83
Chd1P40201 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
Chd1P40201 AC154657.1-201ENSMUST00000226394 775 ntBASIC9.86□□□□□ -0.83
Chd1P40201 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Chd1P40201 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Chd1P40201 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd1P40201 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms